c++ - Failed to make bwa-0.6.1 on MacOS 10.11.6 El Capitan -


i have failed make bwa-0.6.1 on macos 10.11.6 el capitan, error below. downloaded , installed xcode8. running application requires older version of bwa, precisely bwa.0.6.1

gcc -g -wall -o2 -dhave_pthread qsufsort.o bwt_gen.o utils.o bwt.o bwtio.o bwtaln.o bwtgap.o is.o bntseq.o bwtmisc.o bwtindex.o ksw.o stdaln.o simple_dp.o bwaseqio.o bwase.o bwape.o kstring.o cs2nt.o bwtsw2_core.o bwtsw2_main.o bwtsw2_aux.o bwt_lite.o bwtsw2_chain.o bamlite.o fastmap.o bwtsw2_pair.o main.o -o bwa -lm -lz -lpthread undefined symbols architecture x86_64: "_bwt_2occ", referenced from: _bwt_cal_width in bwtaln.o "_bwt_2occ4", referenced from: _bwt_match_gap in bwtgap.o _bsw2_core in bwtsw2_core.o "_bwtl_2occ4", referenced from: _bsw2_core in bwtsw2_core.o ld: symbol(s) not found architecture x86_64 collect2: error: ld returned 1 exit status make: *** [bwa] error 1

desperately need answer.


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